Download

All published work of the narrow-leafed lupin genome sequencing projects are deposited as short read archives (SRAs) in GenBank under BioProjectID: PRJNA248164, PRJNA797109, PRJNA512907 and PRJNA299755.

 

Narrow-leafed lupin pan-genome assembly version 1.0

To download the updated reference genome assembly described in  Garg et al., 2022 (The Plant J, accepted ) and the associated annotated gene sets, please use the links below:

The pan-genome assembly (NLL_pan_genome_v1.0_Feb_2022.fa.gz)

The annotated gene sets with both gene sequences (Lupinus_angustifolius_pan_genome_gene_v1.0.fa.gz) and protein sequences (Lupinus_angustifolius_pan_genome_pep_v1.0.fa.gz)

 

Narrow-leafed lupin genome assembly version 2.0

To download the updated reference genome assembly described in  Garg et al., 2022 (The Plant J, accepted ) and the associated annotated gene sets, please use the links below:

The chromosome level genome assembly (Lupinus_angustifolius_v2.0.fa.gz)

The annotated gene sets with both gene sequences (Lupinus_angustifolius_gene_v2.0.fa.gz) and protein sequences (Lupinus_angustifolius_pep_v2.0.fa.gz)

 

Narrow-leafed lupin genome assembly version 1.0

To download the genome assemblies described in Hane et al., 2017 (Plant Biotech J 15 318-330) and the associated annotated gene sets, please use the links below:

The scaffold assembly (Lupinus_angustifolius_scaffolds_v1.0.fa.zip)

The pseudochromosome assembly (Lupinus_angustifolius_pschrom_v1.0.fa.zip)

The unassigned scaffolds (Lupinus_angustifolius_pschrom_unassigned_scaffolds_v1.0.fa.zip)

The annotated gene sets with both gene sequences (Lupinus_angustifolius_cds_v1.0.fa.zip) and protein sequences (Lupinus_angustifolius_pep_v1.0.fa.zip)

To download the de novo transcriptome assemblies for the RNAseq data described in Kamphuis et al., 2015 (Plant Biotech J 13  14-25) of five different tissue types (leaf, stem, root, flower and seed), please use the links below:

 

De novo Transcriptome Assemblies:

De novo Tanjil transcriptome assembly (Trinity_Tanjil.fasta.zip)

De novo P27255 transcriptome assembly (Trinity_P27255.fasta.zip)

De novo Unicrop transcriptome assembly (Trinity_Unicrop.fasta_.zip)