Publications from CSIRO Research Publications Repository
Narrow-leafed lupin genomic resources
A pan-genome and chromosome-length reference genome of narrow-leafed lupin (Lupinus angustifolius) reveals genomic diversity and insights into key industry and biological traits
Gao, Lingling; Garg, Gagan. A pan-genome and chromosome-length reference genome of narrow-leafed lupin (Lupinus angustifolius) reveals genomic diversity and insights into key industry and biological traits
. Plant Journal. 2022. 14.
http://hdl.handle.net/102.100.100/637786?index=1
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Record Identifier: csiro:EP2024-4555
http://hdl.handle.net/102.100.100/637786?index=1
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Record Identifier: csiro:EP2024-4555
Genomic resources for lupins are coming of age
Kamphuis, Lars; Garg, Gagan; Foley, Rhonda; Singh, Karam. Genomic resources for lupins are coming of age. Legume Science. 2021. 15.
https://doi.org/10.1002/leg3.77
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Record Identifier: csiro:EP2021-2084
https://doi.org/10.1002/leg3.77
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Record Identifier: csiro:EP2021-2084
Phenotypic characterisation and linkage mapping of domestication syndrome traits in yellow lupin (Lupinus luteus L.)
Iqbal, Muhammad Munir; Erskine, William; Berger, Jens; Nelson, Matthew. Phenotypic characterisation and linkage mapping of domestication syndrome traits in yellow lupin (Lupinus luteus L.). Theoretical and Applied Genetics. 2020; 133:2975–2987.
https://doi.org/10.1007/s00122-020-03650-9
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Record Identifier: csiro:EP20809
https://doi.org/10.1007/s00122-020-03650-9
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Record Identifier: csiro:EP20809
Quinolizidine alkaloid biosynthesis in lupins and prospects for grain quality improvement
Frick, Karen; Kamphuis, Lars; Siddique, Kadambot H.M.; Singh, Karam; Foley, Rhonda. Quinolizidine alkaloid biosynthesis in lupins and prospects for grain quality improvement. Frontiers in Plant Science. 2017; 8:87.
https://doi.org/10.3389/fpls.2017.00087
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Record Identifier: csiro:EP167907
https://doi.org/10.3389/fpls.2017.00087
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Record Identifier: csiro:EP167907
Analysis of conglutin seed storage proteins across lupin species using transcriptomic, protein and comparative genomic approaches
Foley, Rhonda; Jimenez-Lopez, Jose; Kamphuis, Lars; Hane, James; Melser, Su; Singh, Karam. Analysis of conglutin seed storage proteins across lupin species using transcriptomic, protein and comparative genomic approaches. BMC Plant Biology. 2015; 15:Article 106.
https://doi.org/10.1186/s12870-015-0485-6
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Record Identifier: csiro:EP148687
https://doi.org/10.1186/s12870-015-0485-6
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Record Identifier: csiro:EP148687
Transcriptome sequencing of different narrow-leafed lupin tissue types provides a comprehensive uni-gene assembly and extensive gene-based molecular markers
Kamphuis, Lars; Hane, James; Nelson, Matthew; Gao, Lingling; Atkins, Craig; Singh, Karam. Transcriptome sequencing of different narrow-leafed lupin tissue types provides a comprehensive uni-gene assembly and extensive gene-based molecular markers. Plant Biotechnology Journal. 2015; 13:14-25.
https://doi.org/10.1111/pbi.12229
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Record Identifier: csiro:EP141722
https://doi.org/10.1111/pbi.12229
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Record Identifier: csiro:EP141722
Development of genomic resources for the narrow-leafed lupin (Lupinus angustifolius): Construction of a Bacterial Artificial Chromosome (BAC) library and BAC-end sequencing
Gao, Lingling; Hane, James; Kamphuis, Lars; Foley, Rhonda; Shi, Bu-Jun; Atkins, Craig; et al. Development of genomic resources for the narrow-leafed lupin (Lupinus angustifolius): Construction of a Bacterial Artificial Chromosome (BAC) library and BAC-end sequencing. BMC Genomics. 2011; 12(521 1471-2164):1-15.
https://doi.org/10.1186/1471-2164-12-521
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Record Identifier: csiro:EP113164
https://doi.org/10.1186/1471-2164-12-521
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Record Identifier: csiro:EP113164
Lupin genetic mapping and synteny
Phenotypic characterisation and linkage mapping of domestication syndrome traits in yellow lupin (Lupinus luteus L.)
Iqbal, Muhammad Munir; Erskine, William; Berger, Jens; Nelson, Matthew. Phenotypic characterisation and linkage mapping of domestication syndrome traits in yellow lupin (Lupinus luteus L.). Theoretical and Applied Genetics. 2020; 133:2975–2987.
https://doi.org/10.1007/s00122-020-03650-9
Access: Public
Record Identifier: csiro:EP20809
https://doi.org/10.1007/s00122-020-03650-9
Access: Public
Record Identifier: csiro:EP20809
Lupin diversity and adaptation
Pangenome of white lupin provides insights into the diversity of the species
Hufnagel, Barbara; Soriano, Alexandre; Taylor, Jemma; Divol, Fanchon; Kroc, Magdalena; Sanders, Heather; et al. Pangenome of white lupin provides insights into the diversity of the species. Plant Biotechnology Journal. 2021; 19:12.
https://doi.org/10.1111/pbi.13678
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Record Identifier: csiro:EP2021-1005
https://doi.org/10.1111/pbi.13678
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Record Identifier: csiro:EP2021-1005
Changing water use and adaptive strategies along rainfall gradients in Mediterranean lupins
Berger, Jens; Ludwig, Christiane; Whisson, Kelley. Changing water use and adaptive strategies along rainfall gradients in Mediterranean lupins. Plant Biology. 2020; 22(2):298-308.
https://doi.org/10.1111/plb.13076
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Record Identifier: csiro:EP124602
https://doi.org/10.1111/plb.13076
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Record Identifier: csiro:EP124602
INDEL variation in the regulatory region of the major flowering time gene LanFTc1 is associated with vernalization response and flowering time in narrow‐leafed lupin (Lupinus angustifolius L.)
Taylor, Candy; Kamphuis, Lars; Zhang, Weilu; Garg, Gagan; Berger, Jens; Mousavi‐Derazmahalleh, Mahsa; et al. INDEL variation in the regulatory region of the major flowering time gene LanFTc1 is associated with vernalization response and flowering time in narrow‐leafed lupin (Lupinus angustifolius L.). Plant, Cell and Environment. 2018; 42(1 Part II):174-187.
https://doi.org/10.1111/pce.13320
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Record Identifier: csiro:EP185182
https://doi.org/10.1111/pce.13320
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Record Identifier: csiro:EP185182
Exploring the genetic and adaptive diversity of a pan‑Mediterranean crop wild relative: narrow‑leafed lupin
Mousavi‐Derazmahalleh, Mahsa; Bayer, Philipp; Bruno, Nevado; Hurgobin, Bhavna; Filatov, Dmitry; Kilian, Andrzej; et al. Exploring the genetic and adaptive diversity of a pan‑Mediterranean
crop wild relative: narrow‑leafed lupin. Theoretical and Applied Genetics. 2018; 131:887-901.
http://hdl.handle.net/102.100.100/87358?index=1
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Record Identifier: csiro:EP185185
http://hdl.handle.net/102.100.100/87358?index=1
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Record Identifier: csiro:EP185185
The essential role of genetic resources in narrow-leafed lupin improvement
Berger, Jens; Clements, John; Nelson, Matthew; Kamphuis, Lars; Singh, Karam; Buirchell, Bevan. The essential role of genetic resources in narrow-leafed lupin improvement. Crop & Pasture Science. 2013; 64:361–373.
https://doi.org/10.1071/CP13092
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Record Identifier: csiro:EP133086
https://doi.org/10.1071/CP13092
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Record Identifier: csiro:EP133086
Domestication bottlenecks limit genetic diversity and constrain adaptation in narrow-leafed lupin (Lupinus angustifolius L.)
Berger, Jens; Buirchell, Bevan; Luckett, David; Nelson, Matthew. Domestication bottlenecks limit genetic diversity and constrain adaptation in narrow-leafed lupin (Lupinus angustifolius L.). Theoretical and Applied Genetics. 2011; 124(4):637-652.
https://doi.org/10.1007/s00122-011-1736-z
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Record Identifier: csiro:EP11731
https://doi.org/10.1007/s00122-011-1736-z
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Record Identifier: csiro:EP11731
Molecular markers linked to domestication traits
DNA markers and genome mapping of the Kuruma shrimp Penaeus japonicus
Li, Y.; Dierens, L.M.; Meadows, J.R.S.; Lyons, R.E. DNA markers and genome mapping of the Kuruma shrimp Penaeus japonicus. In: Aquaculture 2004: Aquaculture: an ecologically sustainable and profitable venture; March 1-5, 2004; Hawaii Convention Center, Honolulu, Hawaii, USA. World Aquaculture Society; 2004. procite:3e4341e0-8011-4301-aff1-58eb43a1f986.
http://hdl.handle.net/102.100.100/185443?index=1
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Record Identifier: procite:3e4341e0-8011-4301-aff1-58eb43a1f986
http://hdl.handle.net/102.100.100/185443?index=1
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Record Identifier: procite:3e4341e0-8011-4301-aff1-58eb43a1f986